Crate noodles_tabix

noodles-tabix handles the reading and writing of the tabix format.

A tabix (TBI) is an index file typically used to allow random access of an accompanied file that is

1. bgzipped,
2. tab-delimited,
3. grouped by reference sequence name, and
4. coordinate sorted by start position.

It can be used to find relevant records for a given genomic region.

Examples

Read a tabix file

use noodles_tabix as tabix;
let index = tabix::fs::read("sample.vcf.gz.tbi")?;

Re-exports

pub use self::fs::read;

pub use self::fs::write;

pub use self::io::Reader;

pub use self::io::Writer;

pub use self::async::Reader as AsyncReader;

pub use self::async::Writer as AsyncWriter;

Modules

async

Async tabix.

fs

tabix filesystem operations.

index

Tabix index.

io

Tabix I/O.

Type Aliases

Index

A tabix index.