use std::io;
use noodles_vcf as vcf;
#[derive(Clone, Debug, Eq, PartialEq)]
pub struct AlternateBases<'a> {
src: &'a [u8],
len: usize,
}
impl<'a> AlternateBases<'a> {
pub(super) fn new(src: &'a [u8], len: usize) -> Self {
Self { src, len }
}
}
impl<'a> AsRef<[u8]> for AlternateBases<'a> {
fn as_ref(&self) -> &[u8] {
self.src
}
}
impl<'a> vcf::variant::record::AlternateBases for AlternateBases<'a> {
fn is_empty(&self) -> bool {
self.len == 0
}
fn len(&self) -> usize {
self.len
}
fn iter(&self) -> Box<dyn Iterator<Item = io::Result<&str>> + '_> {
use super::{value::read_value, Value};
let mut src = self.src;
Box::new((0..self.len()).map(move |_| match read_value(&mut src)? {
Some(Value::String(Some(value))) => Ok(value),
_ => Err(io::Error::new(
io::ErrorKind::InvalidData,
"invalid alt value",
)),
}))
}
}