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use std::io::{self, BufRead, Seek};
use noodles_core::Region;
use crate::{repository::Adapter, Record};
/// An indexed reader adapter.
pub struct IndexedReader<R> {
reader: crate::io::IndexedReader<R>,
}
impl<R> IndexedReader<R>
where
R: BufRead + Seek,
{
/// Creates an indexed reader adapter.
///
/// # Examples
///
/// ```
/// # use std::io;
/// use noodles_fasta::{self as fasta, repository::adapters::IndexedReader};
/// let index = Vec::new();
/// let reader = fasta::io::IndexedReader::new(io::empty(), index);
/// let adapter = IndexedReader::new(reader);
/// ```
pub fn new(reader: crate::io::IndexedReader<R>) -> Self {
Self { reader }
}
}
impl<R> Adapter for IndexedReader<R>
where
R: BufRead + Seek + Send + Sync,
{
fn get(&mut self, name: &[u8]) -> Option<io::Result<Record>> {
let region = Region::new(name, ..);
Some(self.reader.query(®ion))
}
}