pub mod field;
use std::{
error, fmt,
ops::{Deref, DerefMut},
str::{self, FromStr},
};
use indexmap::IndexMap;
use self::field::{Tag, Value};
const DELIMITER: char = ';';
#[derive(Clone, Debug, Default, Eq, PartialEq)]
pub struct Attributes(IndexMap<Tag, Value>);
impl Deref for Attributes {
type Target = IndexMap<Tag, Value>;
fn deref(&self) -> &Self::Target {
&self.0
}
}
impl DerefMut for Attributes {
fn deref_mut(&mut self) -> &mut Self::Target {
&mut self.0
}
}
impl fmt::Display for Attributes {
fn fmt(&self, f: &mut fmt::Formatter<'_>) -> fmt::Result {
use self::field::field_fmt;
for (i, field) in self.iter().enumerate() {
if i > 0 {
DELIMITER.fmt(f)?;
}
field_fmt(field, f)?;
}
Ok(())
}
}
#[derive(Clone, Debug, Eq, PartialEq)]
pub enum ParseError {
InvalidField(field::ParseError),
}
impl error::Error for ParseError {
fn source(&self) -> Option<&(dyn error::Error + 'static)> {
match self {
Self::InvalidField(e) => Some(e),
}
}
}
impl fmt::Display for ParseError {
fn fmt(&self, f: &mut fmt::Formatter<'_>) -> fmt::Result {
match self {
Self::InvalidField(e) => {
write!(f, "invalid field")?;
if let Some(key) = e.key() {
write!(f, ": {key}")?;
}
Ok(())
}
}
}
}
impl Extend<(Tag, Value)> for Attributes {
fn extend<T: IntoIterator<Item = (Tag, Value)>>(&mut self, iter: T) {
self.0.extend(iter);
}
}
impl FromIterator<(Tag, Value)> for Attributes {
fn from_iter<T: IntoIterator<Item = (Tag, Value)>>(iter: T) -> Self {
let mut attributes = Self::default();
attributes.extend(iter);
attributes
}
}
impl FromStr for Attributes {
type Err = ParseError;
fn from_str(s: &str) -> Result<Self, Self::Err> {
use self::field::parse_field;
if s.is_empty() {
return Ok(Self::default());
}
let mut map: IndexMap<Tag, Value> = IndexMap::new();
for raw_field in s.split(DELIMITER) {
let (key, value) = parse_field(raw_field).map_err(ParseError::InvalidField)?;
map.entry(key)
.and_modify(|v| v.extend(value.iter().cloned()))
.or_insert(value);
}
Ok(Self(map))
}
}
#[cfg(test)]
mod tests {
use super::*;
#[test]
fn test_fmt() {
let attributes = Attributes::default();
assert!(attributes.to_string().is_empty());
let attributes: Attributes = [(Tag::from("gene_id"), Value::from("ndls0"))]
.into_iter()
.collect();
assert_eq!(attributes.to_string(), "gene_id=ndls0");
let attributes: Attributes = [
(Tag::from("gene_id"), Value::from("ndls0")),
(Tag::from("gene_name"), Value::from("gene0")),
]
.into_iter()
.collect();
assert_eq!(attributes.to_string(), "gene_id=ndls0;gene_name=gene0")
}
#[test]
fn test_from_str() -> Result<(), ParseError> {
let actual: Attributes = "".parse()?;
let expected = Attributes::default();
assert_eq!(actual, expected);
let s = "gene_id=ndls0";
let actual: Attributes = s.parse()?;
let expected = [(Tag::from("gene_id"), Value::from("ndls0"))]
.into_iter()
.collect();
assert_eq!(actual, expected);
let s = "gene_id=ndls0;gene_name=gene0";
let actual: Attributes = s.parse()?;
let expected = [
(Tag::from("gene_id"), Value::from("ndls0")),
(Tag::from("gene_name"), Value::from("gene0")),
]
.into_iter()
.collect();
assert_eq!(actual, expected);
let s = "gene_id=ndls0;gene_id=ndls1";
let actual: Attributes = s.parse()?;
let expected = [(
Tag::from("gene_id"),
Value::from(vec![String::from("ndls0"), String::from("ndls1")]),
)]
.into_iter()
.collect();
assert_eq!(actual, expected);
Ok(())
}
}