1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215
//! GFF record attributes field value.
use std::{
error, fmt, iter, mem,
str::{self, FromStr},
};
const DELIMITER: char = ',';
/// A GFF record attribute field value.
#[derive(Clone, Debug, Eq, PartialEq)]
pub enum Value {
/// A string.
String(String),
/// An array.
Array(Vec<String>),
}
impl Value {
/// Returns the value as a string, if the value is a string.
///
/// # Examples
///
/// ```
/// use noodles_gff::record::attributes::field::Value;
///
/// let value = Value::from("ndls");
/// assert_eq!(value.as_string(), Some("ndls"));
///
/// let value = Value::from(vec![String::from("ndls0"), String::from("ndls1")]);
/// assert!(value.as_string().is_none());
/// ```
pub fn as_string(&self) -> Option<&str> {
match self {
Self::String(value) => Some(value),
Self::Array(_) => None,
}
}
/// Returns the value as an array, if the value is an array.
///
/// # Examples
///
/// ```
/// use noodles_gff::record::attributes::field::Value;
///
/// let raw_values = vec![String::from("ndls0"), String::from("ndls1")];
/// let value = Value::from(raw_values.clone());
/// assert_eq!(value.as_array(), Some(&raw_values[..]));
///
/// let value = Value::from("ndls");
/// assert!(value.as_array().is_none());
/// ```
pub fn as_array(&self) -> Option<&[String]> {
match self {
Self::String(_) => None,
Self::Array(values) => Some(values),
}
}
/// An iterator over values.
///
/// # Examples
///
/// ```
/// use noodles_gff::record::attributes::field::Value;
///
/// let value = Value::from("ndls");
/// let mut iter = value.iter();
/// assert_eq!(iter.next(), Some(&String::from("ndls")));
/// assert!(iter.next().is_none());
///
/// let value = Value::from(vec![String::from("ndls0"), String::from("ndls1")]);
/// let mut iter = value.iter();
/// assert_eq!(iter.next(), Some(&String::from("ndls0")));
/// assert_eq!(iter.next(), Some(&String::from("ndls1")));
/// assert!(iter.next().is_none());
/// ```
pub fn iter(&self) -> Box<dyn Iterator<Item = &String> + '_> {
match self {
Self::String(value) => Box::new(iter::once(value)),
Self::Array(values) => Box::new(values.iter()),
}
}
}
impl fmt::Display for Value {
fn fmt(&self, f: &mut fmt::Formatter<'_>) -> fmt::Result {
use super::percent_encode;
for (i, value) in self.iter().enumerate() {
if i > 0 {
DELIMITER.fmt(f)?;
}
percent_encode(value).fmt(f)?;
}
Ok(())
}
}
impl Extend<String> for Value {
fn extend<T: IntoIterator<Item = String>>(&mut self, iter: T) {
match self {
Self::String(value) => {
let mut values = vec![value.clone()];
values.extend(iter);
mem::swap(self, &mut Self::Array(values));
}
Self::Array(values) => values.extend(iter),
}
}
}
impl From<&str> for Value {
fn from(s: &str) -> Self {
Self::String(s.into())
}
}
impl From<String> for Value {
fn from(s: String) -> Self {
Self::String(s)
}
}
impl From<Vec<String>> for Value {
fn from(values: Vec<String>) -> Self {
Self::Array(values)
}
}
/// An error returned when a raw GFF record attribute field value fails to parse.
#[derive(Clone, Debug, Eq, PartialEq)]
pub enum ParseError {
/// The input is invalid.
Invalid(str::Utf8Error),
}
impl error::Error for ParseError {
fn source(&self) -> Option<&(dyn error::Error + 'static)> {
match self {
Self::Invalid(e) => Some(e),
}
}
}
impl fmt::Display for ParseError {
fn fmt(&self, f: &mut fmt::Formatter<'_>) -> fmt::Result {
match self {
Self::Invalid(_) => f.write_str("invalid input"),
}
}
}
impl FromStr for Value {
type Err = ParseError;
fn from_str(s: &str) -> Result<Self, Self::Err> {
if let Some((a, b)) = s.split_once(DELIMITER) {
iter::once(a)
.chain(b.split(DELIMITER))
.map(decode_value)
.collect::<Result<_, _>>()
.map(Self::Array)
} else {
decode_value(s).map(Self::String)
}
}
}
fn decode_value(s: &str) -> Result<String, ParseError> {
use super::percent_decode;
percent_decode(s)
.map(|t| t.into_owned())
.map_err(ParseError::Invalid)
}
impl<'a> IntoIterator for &'a Value {
type Item = &'a String;
type IntoIter = Box<dyn Iterator<Item = Self::Item> + 'a>;
fn into_iter(self) -> Self::IntoIter {
self.iter()
}
}
#[cfg(test)]
mod tests {
use super::*;
#[test]
fn test_fmt() {
let value = Value::from("gene0");
assert_eq!(value.to_string(), "gene0");
let value = Value::from("13,21");
assert_eq!(value.to_string(), "13%2C21");
let value = Value::from(vec![String::from("13"), String::from("21")]);
assert_eq!(value.to_string(), "13,21");
}
#[test]
fn test_from_str() {
assert_eq!("gene0".parse(), Ok(Value::from("gene0")));
assert_eq!("13%2C21".parse(), Ok(Value::from("13,21")));
assert_eq!(
"13,21".parse(),
Ok(Value::from(vec![String::from("13"), String::from("21")]))
);
}
}