Crate noodles_vcf

noodles-vcf handles the reading and writing of the VCF format.

Examples

Read all records from a file

use noodles_vcf as vcf;

let mut reader = File::open("sample.vcf").map(BufReader::new).map(vcf::Reader::new)?;
let header = reader.read_header()?.parse()?;

for result in reader.records(&header) {
    let record = result?;
    println!("{:?}", record);
}

Re-exports

• pub use self::header::Header;
• pub use self::reader::Reader;
• pub use self::record::Record;

Modules

• header
  VCF header and fields.
• reader
  VCF reader and iterators.
• record
  VCF record and fields.

Structs

• AsyncReader
  An async VCF reader.
• AsyncWriter
  An async VCF writer.
• Writer
  A VCF writer.

Traits

• VariantReader
  A variant format reader.