polars_row/
lib.rs

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
//! Row format as defined in `arrow-rs`.
//! This currently partially implements that format only for needed types.
//! For completeness sake the format as defined by `arrow-rs` is as followed:
//! Converts [`ArrayRef`] columns into a [row-oriented](self) format.
//!
//! ## Overview
//!
//! The row format is a variable length byte sequence created by
//! concatenating the encoded form of each column. The encoding for
//! each column depends on its datatype (and sort options).
//!
//! The encoding is carefully designed in such a way that escaping is
//! unnecessary: it is never ambiguous as to whether a byte is part of
//! a sentinel (e.g. null) or a value.
//!
//! ## Unsigned Integer Encoding
//!
//! A null integer is encoded as a `0_u8`, followed by a zero-ed number of bytes corresponding
//! to the integer's length.
//!
//! A valid integer is encoded as `1_u8`, followed by the big-endian representation of the
//! integer.
//!
//! ```text
//!               ┌──┬──┬──┬──┐      ┌──┬──┬──┬──┬──┐
//!    3          │03│00│00│00│      │01│00│00│00│03│
//!               └──┴──┴──┴──┘      └──┴──┴──┴──┴──┘
//!               ┌──┬──┬──┬──┐      ┌──┬──┬──┬──┬──┐
//!   258         │02│01│00│00│      │01│00│00│01│02│
//!               └──┴──┴──┴──┘      └──┴──┴──┴──┴──┘
//!               ┌──┬──┬──┬──┐      ┌──┬──┬──┬──┬──┐
//!  23423        │7F│5B│00│00│      │01│00│00│5B│7F│
//!               └──┴──┴──┴──┘      └──┴──┴──┴──┴──┘
//!               ┌──┬──┬──┬──┐      ┌──┬──┬──┬──┬──┐
//!  NULL         │??│??│??│??│      │00│00│00│00│00│
//!               └──┴──┴──┴──┘      └──┴──┴──┴──┴──┘
//!
//!              32-bit (4 bytes)        Row Format
//!  Value        Little Endian
//! ```
//!
//! ## Signed Integer Encoding
//!
//! Signed integers have their most significant sign bit flipped, and are then encoded in the
//! same manner as an unsigned integer.
//!
//! ```text
//!        ┌──┬──┬──┬──┐       ┌──┬──┬──┬──┐       ┌──┬──┬──┬──┬──┐
//!     5  │05│00│00│00│       │05│00│00│80│       │01│80│00│00│05│
//!        └──┴──┴──┴──┘       └──┴──┴──┴──┘       └──┴──┴──┴──┴──┘
//!        ┌──┬──┬──┬──┐       ┌──┬──┬──┬──┐       ┌──┬──┬──┬──┬──┐
//!    -5  │FB│FF│FF│FF│       │FB│FF│FF│7F│       │01│7F│FF│FF│FB│
//!        └──┴──┴──┴──┘       └──┴──┴──┴──┘       └──┴──┴──┴──┴──┘
//!
//!  Value  32-bit (4 bytes)    High bit flipped      Row Format
//!          Little Endian
//! ```
//!
//! ## Float Encoding
//!
//! Floats are converted from IEEE 754 representation to a signed integer representation
//! by flipping all bar the sign bit if they are negative after normalizing nans
//! and signed zeros to a canonical representation.
//!
//! They are then encoded in the same manner as a signed integer.
//!
//! ## Fixed Length Bytes Encoding
//!
//! Fixed length bytes are encoded in the same fashion as primitive types above.
//!
//! For a fixed length array of length `n`:
//!
//! A null is encoded as `0_u8` null sentinel followed by `n` `0_u8` bytes
//!
//! A valid value is encoded as `1_u8` followed by the value bytes
//!
//! ## Variable Length Bytes (including Strings) Encoding
//!
//! A null is encoded as a `0_u8`.
//!
//! An empty byte array is encoded as `1_u8`.
//!
//! A non-null, non-empty byte array is encoded as `2_u8` followed by the byte array
//! encoded using a block based scheme described below.
//!
//! The byte array is broken up into 32-byte blocks, each block is written in turn
//! to the output, followed by `0xFF_u8`. The final block is padded to 32-bytes
//! with `0_u8` and written to the output, followed by the un-padded length in bytes
//! of this final block as a `u8`.
//!
//! Note the following example encodings use a block size of 4 bytes,
//! as opposed to 32 bytes for brevity:
//!
//! ```text
//!                       ┌───┬───┬───┬───┬───┬───┐
//!  "MEEP"               │02 │'M'│'E'│'E'│'P'│04 │
//!                       └───┴───┴───┴───┴───┴───┘
//!
//!                       ┌───┐
//!  ""                   │01 |
//!                       └───┘
//!
//!  NULL                 ┌───┐
//!                       │00 │
//!                       └───┘
//!
//! "Defenestration"      ┌───┬───┬───┬───┬───┬───┐
//!                       │02 │'D'│'e'│'f'│'e'│FF │
//!                       └───┼───┼───┼───┼───┼───┤
//!                           │'n'│'e'│'s'│'t'│FF │
//!                           ├───┼───┼───┼───┼───┤
//!                           │'r'│'a'│'t'│'r'│FF │
//!                           ├───┼───┼───┼───┼───┤
//!                           │'a'│'t'│'i'│'o'│FF │
//!                           ├───┼───┼───┼───┼───┤
//!                           │'n'│00 │00 │00 │01 │
//!                           └───┴───┴───┴───┴───┘
//! ```
//!
//! This approach is loosely inspired by [COBS] encoding, and chosen over more traditional
//! [byte stuffing] as it is more amenable to vectorisation, in particular AVX-256.
//!
//! For the unordered row encoding we use a simpler scheme, we prepend the length
//! encoded as 4 bytes followed by the raw data, with nulls being marked with a
//! length of u32::MAX.
//!
//! ## Dictionary Encoding
//!
//! [`RowsEncoded`] needs to support converting dictionary encoded arrays with unsorted, and
//! potentially distinct dictionaries. One simple mechanism to avoid this would be to reverse
//! the dictionary encoding, and encode the array values directly, however, this would lose
//! the benefits of dictionary encoding to reduce memory and CPU consumption.
//!
//! As such the [`RowsEncoded`] creates an order-preserving mapping
//! for each dictionary encoded column, which allows new dictionary
//! values to be added whilst preserving the sort order.
//!
//! A null dictionary value is encoded as `0_u8`.
//!
//! A non-null dictionary value is encoded as `1_u8` followed by a null-terminated byte array
//! key determined by the order-preserving dictionary encoding
//!
//! ```text
//! ┌──────────┐                 ┌─────┐
//! │  "Bar"   │ ───────────────▶│ 01  │
//! └──────────┘                 └─────┘
//! ┌──────────┐                 ┌─────┬─────┐
//! │"Fabulous"│ ───────────────▶│ 01  │ 02  │
//! └──────────┘                 └─────┴─────┘
//! ┌──────────┐                 ┌─────┐
//! │  "Soup"  │ ───────────────▶│ 05  │
//! └──────────┘                 └─────┘
//! ┌──────────┐                 ┌─────┐
//! │   "ZZ"   │ ───────────────▶│ 07  │
//! └──────────┘                 └─────┘
//!
//! Example Order Preserving Mapping
//! ```
//! Using the map above, the corresponding row format will be
//!
//! ```text
//!                           ┌─────┬─────┬─────┬─────┐
//!    "Fabulous"             │ 01  │ 03  │ 05  │ 00  │
//!                           └─────┴─────┴─────┴─────┘
//!
//!                           ┌─────┬─────┬─────┐
//!    "ZZ"                   │ 01  │ 07  │ 00  │
//!                           └─────┴─────┴─────┘
//!
//!                           ┌─────┐
//!     NULL                  │ 00  │
//!                           └─────┘
//!
//!      Input                  Row Format
//! ```
//!
//! ## Struct Encoding
//!
//! A null is encoded as a `0_u8`.
//!
//! A valid value is encoded as `1_u8` followed by the row encoding of each child.
//!
//! This encoding effectively flattens the schema in a depth-first fashion.
//!
//! For example
//!
//! ```text
//! ┌───────┬────────────────────────┬───────┐
//! │ Int32 │ Struct[Int32, Float32] │ Int32 │
//! └───────┴────────────────────────┴───────┘
//! ```
//!
//! Is encoded as
//!
//! ```text
//! ┌───────┬───────────────┬───────┬─────────┬───────┐
//! │ Int32 │ Null Sentinel │ Int32 │ Float32 │ Int32 │
//! └───────┴───────────────┴───────┴─────────┴───────┘
//! ```
//!
//! ## List Encoding
//!
//! Lists are encoded by first encoding all child elements to the row format.
//!
//! A "canonical byte array" is then constructed by concatenating the row
//! encodings of all their elements into a single binary array, followed
//! by the lengths of each encoded row, and the number of elements, encoded
//! as big endian `u32`.
//!
//! This canonical byte array is then encoded using the variable length byte
//! encoding described above.
//!
//! _The lengths are not strictly necessary but greatly simplify decode, they
//! may be removed in a future iteration_.
//!
//! For example given:
//!
//! ```text
//! [1_u8, 2_u8, 3_u8]
//! [1_u8, null]
//! []
//! null
//! ```
//!
//! The elements would be converted to:
//!
//! ```text
//!     ┌──┬──┐     ┌──┬──┐     ┌──┬──┐     ┌──┬──┐        ┌──┬──┐
//!  1  │01│01│  2  │01│02│  3  │01│03│  1  │01│01│  null  │00│00│
//!     └──┴──┘     └──┴──┘     └──┴──┘     └──┴──┘        └──┴──┘
//!```
//!
//! Which would be grouped into the following canonical byte arrays:
//!
//! ```text
//!                         ┌──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┐
//!  [1_u8, 2_u8, 3_u8]     │01│01│01│02│01│03│00│00│00│02│00│00│00│02│00│00│00│02│00│00│00│03│
//!                         └──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┘
//!                          └──── rows ────┘   └───────── row lengths ─────────┘  └─ count ─┘
//!
//!                         ┌──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┬──┐
//!  [1_u8, null]           │01│01│00│00│00│00│00│02│00│00│00│02│00│00│00│02│
//!                         └──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┴──┘
//!```
//!
//! With `[]` represented by an empty byte array, and `null` a null byte array.
//!
//! These byte arrays will then be encoded using the variable length byte encoding
//! described above.
//!
//! # Ordering
//!
//! ## Float Ordering
//!
//! Floats are totally ordered just like in the rest of Polars,
//! -inf < neg < -0.0 = 0.0 < pos < inf < nan, with all nans being equal.
//!
//! ## Null Ordering
//!
//! The encoding described above will order nulls first, this can be inverted by representing
//! nulls as `0xFF_u8` instead of `0_u8`
//!
//! ## Reverse Column Ordering
//!
//! The order of a given column can be reversed by negating the encoded bytes of non-null values
//!
//! [COBS]: https://en.wikipedia.org/wiki/Consistent_Overhead_Byte_Stuffing
//! [byte stuffing]: https://en.wikipedia.org/wiki/High-Level_Data_Link_Control#Asynchronous_framing

extern crate core;

pub mod decode;
pub mod encode;
pub(crate) mod fixed;
mod row;
mod utils;
pub(crate) mod variable;
mod widths;

use arrow::array::*;
pub type ArrayRef = Box<dyn Array>;

pub use encode::{
    convert_columns, convert_columns_amortized, convert_columns_amortized_no_order,
    convert_columns_no_order,
};
pub use row::{RowEncodingCatOrder, RowEncodingOptions, RowsEncoded};