Enum bio_types::sequence::SequenceReadPairOrientation

pub enum SequenceReadPairOrientation {
    F1R2,
    F2R1,
    R1F2,
    R2F1,
    F1F2,
    R1R2,
    F2F1,
    R2R1,
    None,
}

Representation of sequence read pair orientation (e.g. F1R2 means that the forward read comes first on the reference contig, followed by the reverse read, on the same contig).

This enum can be pretty-printed into a readable string repesentation:

use bio_types::sequence::SequenceReadPairOrientation;

// format into string
println!("{}", SequenceReadPairOrientation::F1R2);
// obtain string via `AsRef<&'static str>`
assert_eq!(SequenceReadPairOrientation::R1F2.as_ref(), "R1F2");

Variants

F1R2

F2R1

R1F2

R2F1

F1F2

R1R2

F2F1

R2R1

None

Trait Implementations

impl AsRef<str> for SequenceReadPairOrientation

fn as_ref(&self) -> &str

Converts this type into a shared reference of the (usually inferred) input type.

impl Clone for SequenceReadPairOrientation

fn clone(&self) -> SequenceReadPairOrientation

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for SequenceReadPairOrientation

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for SequenceReadPairOrientation

fn default() -> Self

Returns the “default value” for a type.

impl Display for SequenceReadPairOrientation

fn fmt(&self, f: &mut Formatter<'_>) -> Result<(), Error>

Formats the value using the given formatter.

impl PartialEq for SequenceReadPairOrientation

fn eq(&self, other: &SequenceReadPairOrientation) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Copy for SequenceReadPairOrientation

impl Eq for SequenceReadPairOrientation

impl StructuralPartialEq for SequenceReadPairOrientation