noodles-fasta 0.45.0

FASTA format reader and writer
Documentation
**noodles-fasta** handles and reading and writing of the FASTA format. FASTA is a text format with no formal specification and only has de facto rules. It typically consists of a list of records, each with a definition on the first line and a sequence in the following lines. The definition starts with a `>` (greater than) character, and directly after it is the reference sequence name. Optionally, whitespace may be used a delimiter for an extra description or metadata of the sequence. For example, ```text reference sequence name | | >sq0 LN:13 | | description ``` The sequence is effectively a byte array of characters representing a base. It is typically hard wrapped at an arbitrary width. For example, the following makes up the sequence `ACGTNACTGG`. ```text ACGT NACT GG ``` # Examples ## Read all records in a FASTA file ```no_run # use std::{fs::File, io::{self, BufReader}}; use noodles_fasta as fasta; let mut reader = File::open("reference.fa") .map(BufReader::new) .map(fasta::io::Reader::new)?; for result in reader.records() { let record = result?; // ... } # Ok::<(), io::Error>(()) ```