List of all items
Structs
- AsyncReader
- AsyncWriter
- Writer
- header::Builder
- header::Header
- header::file_format::FileFormat
- header::format::key::Other
- header::info::key::Other
- header::parser::Builder
- header::parser::Parser
- header::record::key::Other
- header::record::value::map::AlternativeAllele
- header::record::value::map::Builder
- header::record::value::map::Filter
- header::record::value::map::Map
- header::record::value::map::Meta
- header::record::value::map::Other
- header::record::value::map::contig::Contig
- header::record::value::map::contig::name::Name
- header::record::value::map::format::Format
- header::record::value::map::info::Info
- reader::Query
- reader::Reader
- reader::Records
- record::Record
- record::alternate_bases::AlternateBases
- record::alternate_bases::allele::symbol::structural_variant::StructuralVariant
- record::builder::Builder
- record::genotypes::Genotypes
- record::genotypes::genotype::Genotype
- record::genotypes::genotype::field::Field
- record::genotypes::genotype::field::value::genotype::Genotype
- record::genotypes::genotype::field::value::genotype::allele::Allele
- record::genotypes::keys::Keys
- record::ids::Ids
- record::ids::id::Id
- record::info::Info
- record::position::Position
- record::quality_score::QualityScore
- record::reference_bases::ReferenceBases
- record::reference_bases::base::TryFromCharError
Enums
- header::Number
- header::file_format::ParseError
- header::format::key::Key
- header::format::key::ParseError
- header::format::key::Standard
- header::info::key::Key
- header::info::key::ParseError
- header::info::key::Standard
- header::parser::FileFormatOption
- header::parser::ParseError
- header::record::ParseError
- header::record::Record
- header::record::key::Key
- header::record::key::Standard
- header::record::value::Other
- header::record::value::map::TryFromFieldsError
- header::record::value::map::contig::name::ParseError
- header::record::value::map::format::Type
- header::record::value::map::info::Type
- record::EndError
- record::Field
- record::ParseError
- record::alternate_bases::ParseError
- record::alternate_bases::allele::Allele
- record::alternate_bases::allele::ParseError
- record::alternate_bases::allele::symbol::ParseError
- record::alternate_bases::allele::symbol::Symbol
- record::alternate_bases::allele::symbol::structural_variant::ParseError
- record::alternate_bases::allele::symbol::structural_variant::ty::ParseError
- record::alternate_bases::allele::symbol::structural_variant::ty::Type
- record::builder::BuildError
- record::chromosome::Chromosome
- record::chromosome::ParseError
- record::filters::Filters
- record::filters::ParseError
- record::filters::TryFromIteratorError
- record::genotypes::ParseError
- record::genotypes::genotype::GenotypeError
- record::genotypes::genotype::ParseError
- record::genotypes::genotype::TryFromFieldsError
- record::genotypes::genotype::field::ParseError
- record::genotypes::genotype::field::value::ParseError
- record::genotypes::genotype::field::value::Value
- record::genotypes::genotype::field::value::genotype::ParseError
- record::genotypes::genotype::field::value::genotype::TryFromAllelesError
- record::genotypes::genotype::field::value::genotype::allele::ParseError
- record::genotypes::genotype::field::value::genotype::allele::phasing::ParseError
- record::genotypes::genotype::field::value::genotype::allele::phasing::Phasing
- record::genotypes::keys::ParseError
- record::genotypes::keys::TryFromKeyVectorError
- record::ids::ParseError
- record::ids::id::ParseError
- record::info::ParseError
- record::info::TryFromFieldsError
- record::info::field::ParseError
- record::info::field::value::ParseError
- record::info::field::value::Value
- record::quality_score::ParseError
- record::quality_score::TryFromFloatError
- record::reference_bases::ParseError
- record::reference_bases::TryFromBaseVectorError
- record::reference_bases::base::Base
Traits
- VariantReader
- header::record::value::map::Described
- header::record::value::map::Indexed
- header::record::value::map::Inner
- header::record::value::map::Typed
Type Definitions
- header::AlternativeAlleles
- header::Contigs
- header::Filters
- header::Formats
- header::Infos
- header::OtherRecords
- header::SampleNames
- record::position::ParseError
Constants
- header::format::key::ANCESTRAL_HAPLOTYPE_ID
- header::format::key::CONDITIONAL_GENOTYPE_QUALITY
- header::format::key::COPY_NUMBER_CONFIDENCE_INTERVAL
- header::format::key::EXPECTED_ALTERNATE_ALLELE_COUNTS
- header::format::key::FILTER
- header::format::key::FORWARD_STRAND_READ_DEPTHS
- header::format::key::GENOTYPE
- header::format::key::GENOTYPE_COPY_NUMBER
- header::format::key::GENOTYPE_COPY_NUMBER_LIKELIHOODS
- header::format::key::GENOTYPE_COPY_NUMBER_POSTERIOR_PROBABILITIES
- header::format::key::GENOTYPE_COPY_NUMBER_QUALITY
- header::format::key::GENOTYPE_LIKELIHOODS
- header::format::key::GENOTYPE_POSTERIOR_PROBABILITIES
- header::format::key::HAPLOTYPE_ID
- header::format::key::HAPLOTYPE_QUALITY
- header::format::key::MAPPING_QUALITY
- header::format::key::NOVEL_VARIANT_QUALITY_SCORE
- header::format::key::PHASE_SET
- header::format::key::PHASE_SET_LIST
- header::format::key::PHASE_SET_LIST_ORDINALS
- header::format::key::PHASE_SET_LIST_QUALITIES
- header::format::key::PHASING_QUALITY
- header::format::key::READ_DEPTH
- header::format::key::READ_DEPTHS
- header::format::key::REVERSE_STRAND_READ_DEPTHS
- header::format::key::ROUNDED_GENOTYPE_LIKELIHOODS
- header::format::key::ROUNDED_GENOTYPE_POSTERIOR_PROBABILITIES
- header::info::key::ADJACENT_COPY_NUMBER
- header::info::key::ADJACENT_COPY_NUMBER_CONFIDENCE_INTERVALS
- header::info::key::ADJACENT_READ_DEPTHS
- header::info::key::ALLELE_COUNT
- header::info::key::ALLELE_FREQUENCIES
- header::info::key::ANCESTRAL_ALLELE
- header::info::key::BASE_QUALITY
- header::info::key::BREAKEND_CONFIDENCE_INTERVALS
- header::info::key::BREAKEND_COPY_NUMBER
- header::info::key::BREAKEND_EVENT_ID
- header::info::key::BREAKPOINT_IDS
- header::info::key::CIGAR
- header::info::key::COPY_NUMBER_CONFIDENCE_INTERVALS
- header::info::key::DBV_ID
- header::info::key::DB_RIP_ID
- header::info::key::DB_VAR_ID
- header::info::key::END_CONFIDENCE_INTERVALS
- header::info::key::END_POSITION
- header::info::key::EVENT_TYPE
- header::info::key::FORWARD_STRAND_READ_DEPTHS
- header::info::key::IS_IMPRECISE
- header::info::key::IS_IN_1000_GENOMES
- header::info::key::IS_IN_DB_SNP
- header::info::key::IS_IN_HAP_MAP_2
- header::info::key::IS_IN_HAP_MAP_3
- header::info::key::IS_NOVEL
- header::info::key::IS_SOMATIC_MUTATION
- header::info::key::IS_VALIDATED
- header::info::key::MAPPING_QUALITY
- header::info::key::MATE_BREAKEND_IDS
- header::info::key::MICROHOMOLOGY_LENGTHS
- header::info::key::MICROHOMOLOGY_SEQUENCES
- header::info::key::MOBILE_ELEMENT_INFO
- header::info::key::MOBILE_ELEMENT_TRANSDUCTION_INFO
- header::info::key::PARTNER_BREAKEND_ID
- header::info::key::POSITION_CONFIDENCE_INTERVALS
- header::info::key::REPEAT_UNIT_BASE_COUNTS
- header::info::key::REPEAT_UNIT_COUNTS
- header::info::key::REPEAT_UNIT_COUNT_CONFIDENCE_INTERVALS
- header::info::key::REPEAT_UNIT_LENGTHS
- header::info::key::REPEAT_UNIT_SEQUENCES
- header::info::key::REVERSE_STRAND_READ_DEPTHS
- header::info::key::SAMPLES_WITH_DATA_COUNT
- header::info::key::STRAND_BIAS
- header::info::key::SV_CLAIM
- header::info::key::SV_LENGTHS
- header::info::key::SV_TYPE
- header::info::key::TOTAL_ALLELE_COUNT
- header::info::key::TOTAL_DEPTH
- header::info::key::TOTAL_READ_DEPTHS
- header::info::key::TOTAL_REPEAT_SEQUENCE_BASE_COUNTS
- header::info::key::TOTAL_REPEAT_SEQUENCE_BASE_COUNT_CONFIDENCE_INTERVALS
- header::info::key::TOTAL_REPEAT_SEQUENCE_COUNTS
- header::info::key::ZERO_MAPPING_QUALITY_COUNT
- header::record::key::ALTERNATIVE_ALLELE
- header::record::key::ASSEMBLY
- header::record::key::CONTIG
- header::record::key::FILE_FORMAT
- header::record::key::FILTER
- header::record::key::FORMAT
- header::record::key::INFO
- header::record::key::META
- header::record::key::PEDIGREE_DB