seqrepo 0.10.3

Port of (read-only) functionality of biocommons/seqrepo to Rust
Documentation
# Changelog

## [0.10.3]https://github.com/varfish-org/seqrepo-rs/compare/v0.10.2...v0.10.3 (2024-07-25)


### Bug Fixes

* using unbuffered I/O for CacheWritingSeqRepo ([#119]https://github.com/varfish-org/seqrepo-rs/issues/119) ([5e1731b]https://github.com/varfish-org/seqrepo-rs/commit/5e1731b46a13c67bed52ff4d28cf4af78eadebb2)

## [0.10.2]https://github.com/varfish-org/seqrepo-rs/compare/v0.10.1...v0.10.2 (2024-06-10)


### Miscellaneous Chores

* release v0.10.2 ([#115]https://github.com/varfish-org/seqrepo-rs/issues/115) ([ec57dd9]https://github.com/varfish-org/seqrepo-rs/commit/ec57dd9768dbbec57a8f9017a5b8bde9d27f57cb)

## [0.10.1]https://github.com/varfish-org/seqrepo-rs/compare/v0.10.0...v0.10.1 (2024-03-07)


### Bug Fixes

* use  column for seqid alias query ([#100]https://github.com/varfish-org/seqrepo-rs/issues/100) ([19eb0d6]https://github.com/varfish-org/seqrepo-rs/commit/19eb0d66ee745b3386c7b4aee978b80107d20ece)

## [0.10.0]https://github.com/varfish-org/seqrepo-rs/compare/v0.9.0...v0.10.0 (2024-02-08)


### Miscellaneous Chores

* release as v0.10.0 ([b7fe0f0]https://github.com/varfish-org/seqrepo-rs/commit/b7fe0f0501ca3a2e6b4489dde0130cd896f16849)

## [0.9.0]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.8.0...v0.9.0 (2023-11-07)


### Miscellaneous Chores

* force release as 0.9.0 ([6bd37bb]https://www.github.com/varfish-org/seqrepo-rs/commit/6bd37bb4d5e7c03e888f7513591af88288df5b80)

## [0.8.0]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.7.0...v0.8.0 (2023-09-18)


### Features

* various dependency updates, bump version to 0.8.0 ([#80]https://www.github.com/varfish-org/seqrepo-rs/issues/80) ([ae4f964]https://www.github.com/varfish-org/seqrepo-rs/commit/ae4f9642cd03fcd84c865fa12178bc05096db810)

## [0.7.0]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.6.1...v0.7.0 (2023-07-06)


### ⚠ BREAKING CHANGES

* add features for disabling sqlite-based implementation (#74)

### Build System

* add features for disabling sqlite-based implementation ([#74]https://www.github.com/varfish-org/seqrepo-rs/issues/74) ([b7fd2f2]https://www.github.com/varfish-org/seqrepo-rs/commit/b7fd2f29b7812836e0934d0bc9734268699843c3)

### [0.6.1]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.6.0...v0.6.1 (2023-07-04)


### Miscellaneous Chores

* release 0.6.1 with noodles updates ([81341fb]https://www.github.com/varfish-org/seqrepo-rs/commit/81341fb45f2a3c97c70c1df553e3b57e67beb0a1)

## [0.6.0]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.5.1...v0.6.0 (2023-06-12)


### Features

* more thread safety ([#62]https://www.github.com/varfish-org/seqrepo-rs/issues/62) ([3a6e72e]https://www.github.com/varfish-org/seqrepo-rs/commit/3a6e72ea725cc42ceb6215a7dc615db742d1ce58)

### [0.5.1]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.5.0...v0.5.1 (2023-06-06)


### Bug Fixes

* depend on noodles-* rather noodles/features ([#60]https://www.github.com/varfish-org/seqrepo-rs/issues/60) ([#61]https://www.github.com/varfish-org/seqrepo-rs/issues/61) ([51406f2]https://www.github.com/varfish-org/seqrepo-rs/commit/51406f2bfe1e6655a7e9eb390fea1feb9f27fb79)
* removing unused dependencies ([#57]https://www.github.com/varfish-org/seqrepo-rs/issues/57) ([756c2be]https://www.github.com/varfish-org/seqrepo-rs/commit/756c2bec2430fd72f302740bd2308e451ef62f38)

## [0.5.0]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.4.0...v0.5.0 (2023-05-23)


### Features

* losening dependencies ([#55]https://www.github.com/varfish-org/seqrepo-rs/issues/55) ([e467af5]https://www.github.com/varfish-org/seqrepo-rs/commit/e467af5bb46f89004bdde791618bfaf017fa4eee)

## [0.4.0]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.3.0...v0.4.0 (2023-04-24)


### Features

* switch from anyhow to thiserr ([#45]https://www.github.com/varfish-org/seqrepo-rs/issues/45) ([#46]https://www.github.com/varfish-org/seqrepo-rs/issues/46) ([497c17a]https://www.github.com/varfish-org/seqrepo-rs/commit/497c17ae308fc2c2e18b67e4adf7277dfd4e13f1)

## [0.3.0]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.2.3...v0.3.0 (2023-03-31)


### Features

* moving cli to be an example ([#35]https://www.github.com/varfish-org/seqrepo-rs/issues/35) ([#36]https://www.github.com/varfish-org/seqrepo-rs/issues/36) ([0389c65]https://www.github.com/varfish-org/seqrepo-rs/commit/0389c65bdeede3eb9b4ba459a227b9f075408644)

### [0.2.3]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.2.2...v0.2.3 (2023-03-14)


### Bug Fixes

* print SQL query in trace level only ([#32]https://www.github.com/varfish-org/seqrepo-rs/issues/32) ([#33]https://www.github.com/varfish-org/seqrepo-rs/issues/33) ([1aac31e]https://www.github.com/varfish-org/seqrepo-rs/commit/1aac31e30d86cf6d5d77ce75b2cfbaba28410044)

### [0.2.2]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.2.1...v0.2.2 (2023-03-03)


### Bug Fixes

* open options to cache FASTA file ([#30]https://www.github.com/varfish-org/seqrepo-rs/issues/30) ([983e182]https://www.github.com/varfish-org/seqrepo-rs/commit/983e182ec720e09b2e3abca13fe75dfe3b83aa79)

### [0.2.1]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.2.0...v0.2.1 (2023-02-24)


### Bug Fixes

* do not write out values twice when cache writing ([#24]https://www.github.com/varfish-org/seqrepo-rs/issues/24) ([#25]https://www.github.com/varfish-org/seqrepo-rs/issues/25) ([d497e53]https://www.github.com/varfish-org/seqrepo-rs/commit/d497e53c19a3a1165fb11f53d0c4b6cd11da62b1)

## [0.2.0]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.1.2...v0.2.0 (2023-02-23)


### Features

* create cache writing and reading SeqRepo ([#21]https://www.github.com/varfish-org/seqrepo-rs/issues/21) ([#22]https://www.github.com/varfish-org/seqrepo-rs/issues/22) ([2d45533]https://www.github.com/varfish-org/seqrepo-rs/commit/2d45533831183867b16ccbd934c7c953f418270a)

### [0.1.2]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.1.1...v0.1.2 (2023-02-16)


### Bug Fixes

* Cargo.toml for license-file ([#16]https://www.github.com/varfish-org/seqrepo-rs/issues/16) ([197c7e1]https://www.github.com/varfish-org/seqrepo-rs/commit/197c7e1c48fd14d98fb73c9f796ff575b485441d)

### [0.1.1]https://www.github.com/varfish-org/seqrepo-rs/compare/v0.1.0...v0.1.1 (2023-02-16)


### Bug Fixes

* release 0.1.1 to crates.io ([#14]https://www.github.com/varfish-org/seqrepo-rs/issues/14) ([9e3198b]https://www.github.com/varfish-org/seqrepo-rs/commit/9e3198b55f47820d37b34d5560e1b5f6107badf9)

## 0.1.0 (2023-02-16)


### Features

* implement "seqrepo-cli export" for demo purposes ([#9]https://www.github.com/varfish-org/seqrepo-rs/issues/9) ([#10]https://www.github.com/varfish-org/seqrepo-rs/issues/10) ([b7301c7]https://www.github.com/varfish-org/seqrepo-rs/commit/b7301c7bbb9ec1bd9b8a6b6d02b07a7e5b71820a)
* implement read-only access to aliases sqlite3 db ([#1]https://www.github.com/varfish-org/seqrepo-rs/issues/1) ([#2]https://www.github.com/varfish-org/seqrepo-rs/issues/2) ([26539eb]https://www.github.com/varfish-org/seqrepo-rs/commit/26539ebfcd92f3465fc5e56e9011941c947c0514)
* implement SeqRepo based on FastaDir and AliasDb ([#7]https://www.github.com/varfish-org/seqrepo-rs/issues/7) ([#8]https://www.github.com/varfish-org/seqrepo-rs/issues/8) ([99922d6]https://www.github.com/varfish-org/seqrepo-rs/commit/99922d6cd8c1dca711f7268de598e78417990829)
* port over (read-only) FastaDir ([#5]https://www.github.com/varfish-org/seqrepo-rs/issues/5) ([#6]https://www.github.com/varfish-org/seqrepo-rs/issues/6) ([d425221]https://www.github.com/varfish-org/seqrepo-rs/commit/d42522183f2395c219ab75f24673a1b14436ff47)