Struct MmiOutput

pub struct MmiOutput {
    pub id: String,
    pub mmi: String,
    pub score: f64,
    pub name: String,
    pub cui: String,
    pub semantic_types: Vec<String>,
    pub triggers: Vec<Trigger>,
    pub location: Location,
    pub positional_info: Vec<Position>,
    pub tree_codes: Option<Vec<String>>,
}

Main struct for entire library. Represents an entire fielded MMI record as one type.

Fields

id: String

unique identifier

mmi: String

always MMI

score: f64

score of concept relevance, 0-1000, 1000 being perfect

name: String

name of the concept matched

cui: String

CUI for identified UMLS concept

semantic_types: Vec<String>

Semantic Type abbreviations

triggers: Vec<Trigger>

Triggers for MMI to flag this concept

location: Location

Location of concept

positional_info: Vec<Position>

Positional information of concept

tree_codes: Option<Vec<String>>

Optional MeSH tree code(s)

Implementations

impl MmiOutput

pub fn assemble(parts: HashMap<&str, &str>) -> Result<Self, Box<dyn Error>>

Parses a hashmap into MMiOutput field types. Utilizes all other functionality defined in this module to assemble/parse each field into its appropriate format and types.

While this function is useful for building MmiOutput types, parse_record will probably be much more practical since it accepts a string reference and does the field tagging/mapping for you.

Trait Implementations

impl Debug for MmiOutput

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for MmiOutput

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl PartialEq for MmiOutput

fn eq(&self, other: &MmiOutput) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Serialize for MmiOutput

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.

impl StructuralPartialEq for MmiOutput