Enum noodles_cram::record::feature::code::Code

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pub enum Code {
    Bases,
    Scores,
    ReadBase,
    Substitution,
    Insertion,
    Deletion,
    InsertBase,
    QualityScore,
    ReferenceSkip,
    SoftClip,
    Padding,
    HardClip,
}

Expand description

A CRAM record feature kind.

Variants

`Bases`

A stretch of bases (b).

`Scores`

A stretch of quality scores (q).

`ReadBase`

A (base, quality score) pair (B).

`Substitution`

A base substitution (CIGAR op X, M and =; X).

`Insertion`

Inserted bases (CIGAR op I; I).

`Deletion`

A number of deleted bases (CIGAR op D; D).

`InsertBase`

A single inserted base (CIGAR op I; i).

`QualityScore`

A single quality score (Q).

`ReferenceSkip`

A number of skipped bases (CIGAR op N; N).

`SoftClip`

Soft clipped bases (CIGAR op S; S).

`Padding`

A number of padded bases (CIGAR op P; P).

`HardClip`

A number of hard clipped bases (CIGAR op H, H).

Trait Implementations

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impl Clone for Code

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fn clone(&self) -> Code

Returns a copy of the value. Read more

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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more

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impl Debug for Code

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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impl From<Code> for u8

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fn from(code: Code) -> Self

Converts to this type from the input type.

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impl From<Code> for char

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fn from(code: Code) -> Self

Converts to this type from the input type.

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impl PartialEq<Code> for Code

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fn eq(&self, other: &Code) -> bool

This method tests for self and other values to be equal, and is used by ==. Read more

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fn ne(&self, other: &Rhs) -> bool

This method tests for !=.

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impl TryFrom<char> for Code

type Error = TryFromCharError

The type returned in the event of a conversion error.

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fn try_from(c: char) -> Result<Self, Self::Error>

Performs the conversion.

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impl TryFrom<u8> for Code

type Error = TryFromByteError

The type returned in the event of a conversion error.

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fn try_from(n: u8) -> Result<Self, Self::Error>

Performs the conversion.

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impl StructuralPartialEq for Code

Auto Trait Implementations

impl RefUnwindSafe for Code

impl Send for Code

impl Sync for Code

impl Unpin for Code

impl UnwindSafe for Code

Blanket Implementations

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impl<T> Any for T where
T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

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impl<T> Borrow<T> for T where
T: ?Sized,

const: unstable · source

fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

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impl<T> BorrowMut<T> for T where
T: ?Sized,

const: unstable · source

fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

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impl<Q, K> Equivalent<K> for Q where
Q: Eq + ?Sized,
K: Borrow<Q> + ?Sized,

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fn equivalent(&self, key: &K) -> bool

Compare self to key and return true if they are equal.

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impl<T> From<T> for T

const: unstable · source

fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into for T where
U: From<T>,

const: unstable · source

fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> Same<T> for T

type Output = T

Should always be Self

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impl<T> ToOwned for T where
T: Clone,

type Owned = T

The resulting type after obtaining ownership.

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fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more

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fn clone_into(&self, target: &mut T)

🔬 This is a nightly-only experimental API. (toowned_clone_into)

Uses borrowed data to replace owned data, usually by cloning. Read more

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impl<T, U> TryFrom for T where
U: Into<T>,

type Error = Infallible

The type returned in the event of a conversion error.

const: unstable · source

fn try_from(value: U) -> Result<T, <T as TryFrom>::Error>

Performs the conversion.

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impl<T, U> TryInto for T where
U: TryFrom<T>,

type Error = >::Error

The type returned in the event of a conversion error.

const: unstable · source

fn try_into(self) -> Result<U, >::Error>

Performs the conversion.

Enum noodles_cram::record::feature::code::Code

Variants

Bases

Scores

ReadBase

Substitution

Insertion

Deletion

InsertBase

QualityScore

ReferenceSkip

SoftClip

Padding

HardClip

Trait Implementations

impl Clone for Code

fn clone(&self) -> Code

fn clone_from(&mut self, source: &Self)

impl Debug for Code

fn fmt(&self, f: &mut Formatter<'_>) -> Result

impl From<Code> for u8

fn from(code: Code) -> Self

impl From<Code> for char

fn from(code: Code) -> Self

impl PartialEq<Code> for Code

fn eq(&self, other: &Code) -> bool

fn ne(&self, other: &Rhs) -> bool

impl TryFrom<char> for Code

type Error = TryFromCharError

fn try_from(c: char) -> Result<Self, Self::Error>

impl TryFrom<u8> for Code

type Error = TryFromByteError

fn try_from(n: u8) -> Result<Self, Self::Error>

impl Copy for Code

impl Eq for Code

impl StructuralEq for Code

impl StructuralPartialEq for Code

Auto Trait Implementations

impl RefUnwindSafe for Code

impl Send for Code

impl Sync for Code

impl Unpin for Code

impl UnwindSafe for Code

Blanket Implementations

impl<T> Any for T where T: 'static + ?Sized,

fn type_id(&self) -> TypeId

impl<T> Borrow<T> for T where T: ?Sized,

fn borrow(&self) -> &T

impl<T> BorrowMut<T> for T where T: ?Sized,

fn borrow_mut(&mut self) -> &mut T

impl<Q, K> Equivalent<K> for Q where Q: Eq + ?Sized, K: Borrow<Q> + ?Sized,

fn equivalent(&self, key: &K) -> bool

impl<T> From<T> for T

fn from(t: T) -> T

impl<T, U> Into<U> for T where U: From<T>,

fn into(self) -> U

impl<T> Same<T> for T

type Output = T

impl<T> ToOwned for T where T: Clone,

type Owned = T

fn to_owned(&self) -> T

fn clone_into(&self, target: &mut T)

impl<T, U> TryFrom<U> for T where U: Into<T>,

type Error = Infallible

fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

impl<T, U> TryInto<U> for T where U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

`Bases`

`Scores`

`ReadBase`

`Substitution`

`Insertion`

`Deletion`

`InsertBase`

`QualityScore`

`ReferenceSkip`

`SoftClip`

`Padding`

`HardClip`

impl<T> Any for T where
T: 'static + ?Sized,

impl<T> Borrow<T> for T where
T: ?Sized,

impl<T> BorrowMut<T> for T where
T: ?Sized,

impl<Q, K> Equivalent<K> for Q where
Q: Eq + ?Sized,
K: Borrow<Q> + ?Sized,

impl<T, U> Into<U> for T where
U: From<T>,

impl<T> ToOwned for T where
T: Clone,

impl<T, U> TryFrom<U> for T where
U: Into<T>,

impl<T, U> TryInto<U> for T where
U: TryFrom<T>,