Struct Record

pub struct Record<'c> { /* private fields */ }

A CRAM record.

Trait Implementations

impl<'c> Clone for Record<'c>

fn clone(&self) -> Record<'c>

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl<'c> Debug for Record<'c>

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for Record<'_>

fn default() -> Self

Returns the “default value” for a type.

impl<'c> PartialEq for Record<'c>

fn eq(&self, other: &Record<'c>) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Record for Record<'_>

fn name(&self) -> Option<&BStr>

Returns the name.

fn flags(&self) -> Result<Flags>

Returns the flags.

fn reference_sequence_id<'r, 'h: 'r>( &'r self, _: &'h Header, ) -> Option<Result<usize>>

Returns the reference sequence ID.

fn alignment_start(&self) -> Option<Result<Position>>

Returns the alignment start.

fn mapping_quality(&self) -> Option<Result<MappingQuality>>

Returns the mapping quality.

fn cigar(&self) -> Box<dyn Cigar + '_>

Returns the CIGAR operations.

fn mate_reference_sequence_id<'r, 'h: 'r>( &'r self, _: &'h Header, ) -> Option<Result<usize>>

Returns the mate reference sequence ID.

fn mate_alignment_start(&self) -> Option<Result<Position>>

Returns the mate alignment start.

fn template_length(&self) -> Result<i32>

Returns the template length.

fn sequence(&self) -> Box<dyn Sequence + '_>

Returns the sequence.

fn quality_scores(&self) -> Box<dyn QualityScores + '_>

Returns the quality scores.

fn data(&self) -> Box<dyn Data + '_>

Returns the data.

fn alignment_span(&self) -> Option<Result<usize>>

Returns the alignment span.

fn alignment_end(&self) -> Option<Result<Position>>

Calculates the end position.

fn reference_sequence<'h>( &self, header: &'h Header, ) -> Option<Result<(&'h BStr, &'h Map<ReferenceSequence>), Error>>

Returns the associated reference sequence.

fn mate_reference_sequence<'h>( &self, header: &'h Header, ) -> Option<Result<(&'h BStr, &'h Map<ReferenceSequence>), Error>>

Returns the associated mate reference sequence.

impl<'c> StructuralPartialEq for Record<'c>