Struct noodles_fasta::indexed_reader::Builder

pub struct Builder { /* private fields */ }

An indexed FASTA reader builder.

Implementations

impl Builder

pub fn set_index(self, index: Index) -> Self

Sets an index.

Examples

use noodles_fasta::{fai, indexed_reader::Builder};
let index = fai::Index::default();
let builder = Builder::default().set_index(index);

pub fn build_from_path<P>( self, src: P ) -> Result<IndexedReader<Box<dyn BufReadSeek>>>where P: AsRef<Path>,

Builds an indexed FASTA reader from a path.

Examples

use noodles_fasta::indexed_reader::Builder;
let reader = Builder::default().build_from_path("reference.fa")?;

pub fn build_from_reader<R>(self, reader: R) -> Result<IndexedReader<R>>where R: BufRead,

Builds an indexed FASTA reader from a reader.

Examples

use noodles_fasta::{fai, indexed_reader::Builder};

let index = fai::Index::default();
let data = [];
let builder = Builder::default()
    .set_index(index)
    .build_from_reader(&data[..])?;

Trait Implementations

impl Default for Builder

fn default() -> Builder

Returns the “default value” for a type.