Struct Op

pub struct Op { /* private fields */ }

An alignment record CIGAR operation.

Implementations

impl Op

pub const fn new(kind: Kind, len: usize) -> Self

Creates a CIGAR operation.

Examples

use noodles_sam::alignment::record::cigar::{op::Kind, Op};

let op = Op::new(Kind::Match, 13);

assert_eq!(op.kind(), Kind::Match);
assert_eq!(op.len(), 13);

pub fn kind(self) -> Kind

Returns the kind of the operation.

Examples

use noodles_sam::alignment::record::cigar::{op::Kind, Op};
let op = Op::new(Kind::Match, 13);
assert_eq!(op.kind(), Kind::Match);

pub fn len(self) -> usize

Returns the length of the operation.

Examples

use noodles_sam::alignment::record::cigar::{op::Kind, Op};
let op = Op::new(Kind::Match, 13);
assert_eq!(op.len(), 13);

pub fn is_empty(self) -> bool

Returns whether the operation is a no-op.

That is, whether the operation has a length of 0.

Examples

use noodles_sam::alignment::record::cigar::{op::Kind, Op};

let op = Op::new(Kind::Match, 0);
assert!(op.is_empty());

let op = Op::new(Kind::Match, 13);
assert!(!op.is_empty());

Trait Implementations

impl Clone for Op

fn clone(&self) -> Op

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Op

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Extend<Op> for Cigar

fn extend<T: IntoIterator<Item = Op>>(&mut self, iter: T)

Extends a collection with the contents of an iterator.

fn extend_one(&mut self, item: A)

🔬This is a nightly-only experimental API. (extend_one)

Extends a collection with exactly one element.

fn extend_reserve(&mut self, additional: usize)

🔬This is a nightly-only experimental API. (extend_one)

Reserves capacity in a collection for the given number of additional elements.

impl FromIterator<Op> for Cigar

fn from_iter<T: IntoIterator<Item = Op>>(iter: T) -> Self

Creates a value from an iterator.

impl PartialEq for Op

fn eq(&self, other: &Op) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Copy for Op

impl Eq for Op

impl StructuralPartialEq for Op