Struct noodles_vcf::indexed_reader::Builder

pub struct Builder { /* private fields */ }

An indexed VCF reader builder.

Implementations

impl Builder

pub fn set_index(self, index: Index) -> Self

Sets an index.

Examples

use noodles_csi as csi;
use noodles_vcf::indexed_reader::Builder;

let index = csi::Index::default();
let builder = Builder::default().set_index(index);

pub fn build_from_path<P>(self, src: P) -> Result<IndexedReader<File>>where P: AsRef<Path>,

Builds an indexed VCF reader from a path.

Examples

use noodles_vcf::indexed_reader::Builder;
let reader = Builder::default().build_from_path("sample.vcf.gz")?;

pub fn build_from_reader<R>(self, reader: R) -> Result<IndexedReader<R>>where R: Read,

Builds an indexed VCF reader from a reader.

Examples

use noodles_csi as csi;
use noodles_vcf::indexed_reader::Builder;

let index = csi::Index::default();
let data = [];
let reader = Builder::default()
    .set_index(index)
    .build_from_reader(&data[..])?;

Trait Implementations

impl Default for Builder

fn default() -> Builder

Returns the “default value” for a type.