Enum noodles_vcf::header::parser::ParseError

pub enum ParseError {
    MissingFileFormat,
    UnexpectedFileFormat,
    InvalidFileFormat(ParseError),
    InvalidRecord(ParseError),
    InvalidRecordValue(AddError),
    MissingHeader,
    InvalidHeader(String, String),
    DuplicateSampleName(String),
    ExpectedEof,
    StringMapPositionMismatch((usize, String), (usize, String)),
}

An error returned when a raw VCF header fails to parse.

Variants

MissingFileFormat

The file format (fileformat) is missing.

UnexpectedFileFormat

The file format (fileformat) appears other than the first line.

InvalidFileFormat(ParseError)

The file format (fileformat) is invalid.

InvalidRecord(ParseError)

A record is invalid.

InvalidRecordValue(AddError)

A record has an invalid value.

MissingHeader

The header is missing.

InvalidHeader(String, String)

The header is invalid.

DuplicateSampleName(String)

A sample name is duplicated.

§ 1.5 Header line syntax (2021-01-13): “Duplicate sample IDs are not allowed.”

ExpectedEof

More data unexpectedly appears after the header header (#CHROM…).

StringMapPositionMismatch((usize, String), (usize, String))

The position of the entry in the string match does not match the absolute position defined by the IDX field of a record.

Trait Implementations

impl Clone for ParseError

fn clone(&self) -> ParseError

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for ParseError

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Display for ParseError

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Error for ParseError

fn source(&self) -> Option<&(dyn Error + 'static)>

The lower-level source of this error, if any.

fn description(&self) -> &str

👎Deprecated since 1.42.0: use the Display impl or to_string()

fn cause(&self) -> Option<&dyn Error>

👎Deprecated since 1.33.0: replaced by Error::source, which can support downcasting

fn provide<'a>(&'a self, request: &mut Request<'a>)

🔬This is a nightly-only experimental API. (error_generic_member_access)

Provides type based access to context intended for error reports.

impl PartialEq<ParseError> for ParseError

fn eq(&self, other: &ParseError) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

This method tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Eq for ParseError

impl StructuralEq for ParseError

impl StructuralPartialEq for ParseError