Struct BaseModificationState

pub struct BaseModificationState<'a> { /* private fields */ }

struct containing the internal state required to access the base modifications for a bam::Record

Implementations

impl BaseModificationState<'_>

pub fn buffer_next_mods(&mut self) -> Result<usize>

pub fn recorded<'a>(&self) -> &'a [i32]

Return an array containing the modification codes listed for this record. Positive values are ascii character codes (eg m), negative values are chEBI codes.

pub fn query_type<'a>(&self, code: i32) -> Result<BaseModificationMetadata>

Return metadata for the specified character code indicating the strand the base modification was called on, whether the tag uses implicit mode and the ascii code for the canonical base. If there are multiple modifications with the same code this will return the data for the first mod. See https://github.com/samtools/htslib/issues/1635

Trait Implementations

impl Drop for BaseModificationState<'_>

fn drop<'a>(&mut self)

Executes the destructor for this type.