Struct HeaderView

pub struct HeaderView { /* private fields */ }

Implementations

impl HeaderView

pub fn from_header(header: &Header) -> Self

Create a new HeaderView from a pre-populated Header object

pub fn from_bytes(header_string: &[u8]) -> Self

Create a new HeaderView from bytes

pub fn new(inner: *mut bam_hdr_t) -> Self

Create a new HeaderView from the underlying Htslib type, and own it.

pub fn inner(&self) -> &bam_hdr_t

pub fn inner_ptr(&self) -> *const bam_hdr_t

pub fn inner_mut(&mut self) -> &mut bam_hdr_t

pub fn inner_ptr_mut(&mut self) -> *mut bam_hdr_t

pub fn tid(&self, name: &[u8]) -> Option<u32>

pub fn tid2name(&self, tid: u32) -> &[u8]

pub fn target_count(&self) -> u32

pub fn target_names(&self) -> Vec<&[u8]>

pub fn target_len(&self, tid: u32) -> Option<u64>

pub fn as_bytes(&self) -> &[u8]

Retrieve the textual SAM header as bytes

Trait Implementations

impl Clone for HeaderView

fn clone(&self) -> Self

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for HeaderView

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Drop for HeaderView

fn drop(&mut self)

Executes the destructor for this type.