pub struct Reader<'r, R> { /* private fields */ }
Expand description
A sequence reader.
This is used for lower-level reading of the sequence. It implements Read
and BufRead
to
return raw bases sans newlines. It reads up to the next record definition or EOF.
This is created by calling super::Reader::sequence_reader
.
Trait Implementations§
source§impl<'r, R> BufRead for Reader<'r, R>where
R: BufRead,
impl<'r, R> BufRead for Reader<'r, R>where
R: BufRead,
source§fn fill_buf(&mut self) -> Result<&[u8]>
fn fill_buf(&mut self) -> Result<&[u8]>
Returns the contents of the internal buffer, filling it with more data
from the inner reader if it is empty. Read more
source§fn consume(&mut self, amt: usize)
fn consume(&mut self, amt: usize)
Tells this buffer that
amt
bytes have been consumed from the buffer,
so they should no longer be returned in calls to read
. Read moresource§fn has_data_left(&mut self) -> Result<bool, Error>
fn has_data_left(&mut self) -> Result<bool, Error>
🔬This is a nightly-only experimental API. (
buf_read_has_data_left
)Checks if the underlying
Read
has any data left to be read. Read more1.83.0 · source§fn skip_until(&mut self, byte: u8) -> Result<usize, Error>
fn skip_until(&mut self, byte: u8) -> Result<usize, Error>
Skips all bytes until the delimiter
byte
or EOF is reached. Read more1.0.0 · source§fn read_line(&mut self, buf: &mut String) -> Result<usize, Error>
fn read_line(&mut self, buf: &mut String) -> Result<usize, Error>
Reads all bytes until a newline (the
0xA
byte) is reached, and append
them to the provided String
buffer. Read moresource§impl<'r, R> Read for Reader<'r, R>where
R: BufRead,
impl<'r, R> Read for Reader<'r, R>where
R: BufRead,
source§fn read(&mut self, buf: &mut [u8]) -> Result<usize>
fn read(&mut self, buf: &mut [u8]) -> Result<usize>
Pull some bytes from this source into the specified buffer, returning
how many bytes were read. Read more
1.36.0 · source§fn read_vectored(&mut self, bufs: &mut [IoSliceMut<'_>]) -> Result<usize, Error>
fn read_vectored(&mut self, bufs: &mut [IoSliceMut<'_>]) -> Result<usize, Error>
Like
read
, except that it reads into a slice of buffers. Read moresource§fn is_read_vectored(&self) -> bool
fn is_read_vectored(&self) -> bool
🔬This is a nightly-only experimental API. (
can_vector
)1.0.0 · source§fn read_to_end(&mut self, buf: &mut Vec<u8>) -> Result<usize, Error>
fn read_to_end(&mut self, buf: &mut Vec<u8>) -> Result<usize, Error>
Reads all bytes until EOF in this source, placing them into
buf
. Read more1.0.0 · source§fn read_to_string(&mut self, buf: &mut String) -> Result<usize, Error>
fn read_to_string(&mut self, buf: &mut String) -> Result<usize, Error>
Reads all bytes until EOF in this source, appending them to
buf
. Read more1.6.0 · source§fn read_exact(&mut self, buf: &mut [u8]) -> Result<(), Error>
fn read_exact(&mut self, buf: &mut [u8]) -> Result<(), Error>
Reads the exact number of bytes required to fill
buf
. Read moresource§fn read_buf(&mut self, buf: BorrowedCursor<'_>) -> Result<(), Error>
fn read_buf(&mut self, buf: BorrowedCursor<'_>) -> Result<(), Error>
🔬This is a nightly-only experimental API. (
read_buf
)Pull some bytes from this source into the specified buffer. Read more
source§fn read_buf_exact(&mut self, cursor: BorrowedCursor<'_>) -> Result<(), Error>
fn read_buf_exact(&mut self, cursor: BorrowedCursor<'_>) -> Result<(), Error>
🔬This is a nightly-only experimental API. (
read_buf
)Reads the exact number of bytes required to fill
cursor
. Read more1.0.0 · source§fn by_ref(&mut self) -> &mut Selfwhere
Self: Sized,
fn by_ref(&mut self) -> &mut Selfwhere
Self: Sized,
Creates a “by reference” adaptor for this instance of
Read
. Read moreAuto Trait Implementations§
impl<'r, R> Freeze for Reader<'r, R>
impl<'r, R> RefUnwindSafe for Reader<'r, R>where
R: RefUnwindSafe,
impl<'r, R> Send for Reader<'r, R>where
R: Send,
impl<'r, R> Sync for Reader<'r, R>where
R: Sync,
impl<'r, R> Unpin for Reader<'r, R>
impl<'r, R> !UnwindSafe for Reader<'r, R>
Blanket Implementations§
source§impl<T> BorrowMut<T> for Twhere
T: ?Sized,
impl<T> BorrowMut<T> for Twhere
T: ?Sized,
source§fn borrow_mut(&mut self) -> &mut T
fn borrow_mut(&mut self) -> &mut T
Mutably borrows from an owned value. Read more
source§impl<B> BufReadExt for Bwhere
B: BufRead,
impl<B> BufReadExt for Bwhere
B: BufRead,
source§fn byte_lines(self) -> ByteLines<Self>where
Self: Sized,
fn byte_lines(self) -> ByteLines<Self>where
Self: Sized,
Returns an iterator over the lines of this reader, where each line
is represented as a byte string. Read more
source§fn byte_records(self, terminator: u8) -> ByteRecords<Self>where
Self: Sized,
fn byte_records(self, terminator: u8) -> ByteRecords<Self>where
Self: Sized,
Returns an iterator over byte-terminated records of this reader, where
each record is represented as a byte string. Read more
source§fn for_byte_line<F>(&mut self, for_each_line: F) -> Result<(), Error>
fn for_byte_line<F>(&mut self, for_each_line: F) -> Result<(), Error>
Executes the given closure on each line in the underlying reader. Read more
source§fn for_byte_record<F>(
&mut self,
terminator: u8,
for_each_record: F,
) -> Result<(), Error>
fn for_byte_record<F>( &mut self, terminator: u8, for_each_record: F, ) -> Result<(), Error>
Executes the given closure on each byte-terminated record in the
underlying reader. Read more
source§impl<R> ReadBytesExt for R
impl<R> ReadBytesExt for R
source§fn read_u8(&mut self) -> Result<u8, Error>
fn read_u8(&mut self) -> Result<u8, Error>
Reads an unsigned 8 bit integer from the underlying reader. Read more
source§fn read_i8(&mut self) -> Result<i8, Error>
fn read_i8(&mut self) -> Result<i8, Error>
Reads a signed 8 bit integer from the underlying reader. Read more
source§fn read_u16<T>(&mut self) -> Result<u16, Error>where
T: ByteOrder,
fn read_u16<T>(&mut self) -> Result<u16, Error>where
T: ByteOrder,
Reads an unsigned 16 bit integer from the underlying reader. Read more
source§fn read_i16<T>(&mut self) -> Result<i16, Error>where
T: ByteOrder,
fn read_i16<T>(&mut self) -> Result<i16, Error>where
T: ByteOrder,
Reads a signed 16 bit integer from the underlying reader. Read more
source§fn read_u24<T>(&mut self) -> Result<u32, Error>where
T: ByteOrder,
fn read_u24<T>(&mut self) -> Result<u32, Error>where
T: ByteOrder,
Reads an unsigned 24 bit integer from the underlying reader. Read more
source§fn read_i24<T>(&mut self) -> Result<i32, Error>where
T: ByteOrder,
fn read_i24<T>(&mut self) -> Result<i32, Error>where
T: ByteOrder,
Reads a signed 24 bit integer from the underlying reader. Read more
source§fn read_u32<T>(&mut self) -> Result<u32, Error>where
T: ByteOrder,
fn read_u32<T>(&mut self) -> Result<u32, Error>where
T: ByteOrder,
Reads an unsigned 32 bit integer from the underlying reader. Read more
source§fn read_i32<T>(&mut self) -> Result<i32, Error>where
T: ByteOrder,
fn read_i32<T>(&mut self) -> Result<i32, Error>where
T: ByteOrder,
Reads a signed 32 bit integer from the underlying reader. Read more
source§fn read_u48<T>(&mut self) -> Result<u64, Error>where
T: ByteOrder,
fn read_u48<T>(&mut self) -> Result<u64, Error>where
T: ByteOrder,
Reads an unsigned 48 bit integer from the underlying reader. Read more
source§fn read_i48<T>(&mut self) -> Result<i64, Error>where
T: ByteOrder,
fn read_i48<T>(&mut self) -> Result<i64, Error>where
T: ByteOrder,
Reads a signed 48 bit integer from the underlying reader. Read more
source§fn read_u64<T>(&mut self) -> Result<u64, Error>where
T: ByteOrder,
fn read_u64<T>(&mut self) -> Result<u64, Error>where
T: ByteOrder,
Reads an unsigned 64 bit integer from the underlying reader. Read more
source§fn read_i64<T>(&mut self) -> Result<i64, Error>where
T: ByteOrder,
fn read_i64<T>(&mut self) -> Result<i64, Error>where
T: ByteOrder,
Reads a signed 64 bit integer from the underlying reader. Read more
source§fn read_u128<T>(&mut self) -> Result<u128, Error>where
T: ByteOrder,
fn read_u128<T>(&mut self) -> Result<u128, Error>where
T: ByteOrder,
Reads an unsigned 128 bit integer from the underlying reader. Read more
source§fn read_i128<T>(&mut self) -> Result<i128, Error>where
T: ByteOrder,
fn read_i128<T>(&mut self) -> Result<i128, Error>where
T: ByteOrder,
Reads a signed 128 bit integer from the underlying reader. Read more
source§fn read_uint<T>(&mut self, nbytes: usize) -> Result<u64, Error>where
T: ByteOrder,
fn read_uint<T>(&mut self, nbytes: usize) -> Result<u64, Error>where
T: ByteOrder,
Reads an unsigned n-bytes integer from the underlying reader. Read more
source§fn read_int<T>(&mut self, nbytes: usize) -> Result<i64, Error>where
T: ByteOrder,
fn read_int<T>(&mut self, nbytes: usize) -> Result<i64, Error>where
T: ByteOrder,
Reads a signed n-bytes integer from the underlying reader. Read more
source§fn read_uint128<T>(&mut self, nbytes: usize) -> Result<u128, Error>where
T: ByteOrder,
fn read_uint128<T>(&mut self, nbytes: usize) -> Result<u128, Error>where
T: ByteOrder,
Reads an unsigned n-bytes integer from the underlying reader.
source§fn read_int128<T>(&mut self, nbytes: usize) -> Result<i128, Error>where
T: ByteOrder,
fn read_int128<T>(&mut self, nbytes: usize) -> Result<i128, Error>where
T: ByteOrder,
Reads a signed n-bytes integer from the underlying reader.
source§fn read_f32<T>(&mut self) -> Result<f32, Error>where
T: ByteOrder,
fn read_f32<T>(&mut self) -> Result<f32, Error>where
T: ByteOrder,
Reads a IEEE754 single-precision (4 bytes) floating point number from
the underlying reader. Read more
source§fn read_f64<T>(&mut self) -> Result<f64, Error>where
T: ByteOrder,
fn read_f64<T>(&mut self) -> Result<f64, Error>where
T: ByteOrder,
Reads a IEEE754 double-precision (8 bytes) floating point number from
the underlying reader. Read more
source§fn read_u16_into<T>(&mut self, dst: &mut [u16]) -> Result<(), Error>where
T: ByteOrder,
fn read_u16_into<T>(&mut self, dst: &mut [u16]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of unsigned 16 bit integers from the underlying
reader. Read more
source§fn read_u32_into<T>(&mut self, dst: &mut [u32]) -> Result<(), Error>where
T: ByteOrder,
fn read_u32_into<T>(&mut self, dst: &mut [u32]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of unsigned 32 bit integers from the underlying
reader. Read more
source§fn read_u64_into<T>(&mut self, dst: &mut [u64]) -> Result<(), Error>where
T: ByteOrder,
fn read_u64_into<T>(&mut self, dst: &mut [u64]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of unsigned 64 bit integers from the underlying
reader. Read more
source§fn read_u128_into<T>(&mut self, dst: &mut [u128]) -> Result<(), Error>where
T: ByteOrder,
fn read_u128_into<T>(&mut self, dst: &mut [u128]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of unsigned 128 bit integers from the underlying
reader. Read more
source§fn read_i8_into(&mut self, dst: &mut [i8]) -> Result<(), Error>
fn read_i8_into(&mut self, dst: &mut [i8]) -> Result<(), Error>
Reads a sequence of signed 8 bit integers from the underlying reader. Read more
source§fn read_i16_into<T>(&mut self, dst: &mut [i16]) -> Result<(), Error>where
T: ByteOrder,
fn read_i16_into<T>(&mut self, dst: &mut [i16]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of signed 16 bit integers from the underlying
reader. Read more
source§fn read_i32_into<T>(&mut self, dst: &mut [i32]) -> Result<(), Error>where
T: ByteOrder,
fn read_i32_into<T>(&mut self, dst: &mut [i32]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of signed 32 bit integers from the underlying
reader. Read more
source§fn read_i64_into<T>(&mut self, dst: &mut [i64]) -> Result<(), Error>where
T: ByteOrder,
fn read_i64_into<T>(&mut self, dst: &mut [i64]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of signed 64 bit integers from the underlying
reader. Read more
source§fn read_i128_into<T>(&mut self, dst: &mut [i128]) -> Result<(), Error>where
T: ByteOrder,
fn read_i128_into<T>(&mut self, dst: &mut [i128]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of signed 128 bit integers from the underlying
reader. Read more
source§fn read_f32_into<T>(&mut self, dst: &mut [f32]) -> Result<(), Error>where
T: ByteOrder,
fn read_f32_into<T>(&mut self, dst: &mut [f32]) -> Result<(), Error>where
T: ByteOrder,
Reads a sequence of IEEE754 single-precision (4 bytes) floating
point numbers from the underlying reader. Read more
source§fn read_f32_into_unchecked<T>(&mut self, dst: &mut [f32]) -> Result<(), Error>where
T: ByteOrder,
fn read_f32_into_unchecked<T>(&mut self, dst: &mut [f32]) -> Result<(), Error>where
T: ByteOrder,
👎Deprecated since 1.2.0: please use
read_f32_into
insteadDEPRECATED. Read more